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RIVAS PARDO LAB
Mechano-Biology Group
DOWNLOADS
LAB FILES
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POLYMER ELASTICITY Multi-dLc Analysis
Igor Procedure for the analysis of AFM-FX including with a new module for the fitting of multiple Lc of FX. The file is based on the software developed by Fernandez lab (Columbia Univ). The file was written on Igor v6.2, but also can be run on newer version (v7 and v8).
STEP COUNTER
MT Data Analysis
Software based on Igor (v7) for importing and fitting data collected on MT experiments. The panel allow to navigate through the trace recording the step size and the time of the event. Also allows to visualize consolidated step size distributions from the (un)folding events present on the recordings.
STEP COUNTER
MT Data Analysis
Software based on Igor (v7) for importing and fitting data collected on MT experiments. The panel allow to navigate through the trace recording the step size and the time of the event. Also allows to visualize consolidated step size distributions from the (un)folding events present on the recordings.
MT SOFTWARE
(C++)
Software written in C++ for controlling a ultra-fast Magnetic tweezers based. This software was originally developed by Fernandez Lab and considered a voice-coil magnet positioner or electromagnet, and high speed camera (CMOS Ximea). This software allows data recording up to 1200 Hz.
THESIS ON TITIN ELASTICITY
Muscles are made of three main filaments: actin, myosin, and titin. Whereas the first two generate active contractile work, titin determinates the elasticity of the sarcomere. We are looking for highly motived student to join the lab on the exciting field of titin elasticity. Download the ad for more the details.
STUDENT'S THESIS
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MULTIMEDIA
TRACKING A SINGLE BEAD
July, 2019
How molecules diffuse inside the cell? Using a small speaker, a Petri dish and two cell phones–for tracking and video recording–, we calculated the diffusion coefficient for the red particle (bead). We use a short MatLab routine to track the red bead along the video. Video and MatLab script developed with the help of Romina Muñoz at SMAT-C USACH. Check files above.
GRABBING SINGLE MOLECULES
Jul 16, 2019
One of the Very first single molecule recording on Mjolnir after of the reassemble at the CGB Univ Mayor. Protein: I10 titin domain.
TRACKING A SINGLE BEAD
July 12, 2019
How molecules diffuse inside the cell? Using a small speaker, a Petri dish and two cell phones–for tracking and video recording–, we calculated the diffusion coefficient for the red particle (bead). We use a short MatLab routine to track the red bead along the video. Video and MatLab script developed with the help of Romina Muñoz at SMAT-C USACH. Check files above.
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Isopeptide bond on Bacterial PILI
Aug 16, 2020
Streptococcus pyogenes is formidable colonizer of human epithelium. One of the reason is the presence of covalent bonds in the pili proteins that prevents the mechanical unfolding during the adhesion. This bond is the isopeptide bond, which is made between the side chain of a Lysine and Asparigine residue.
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GALLERY
